{"version":1,"pages":[{"id":"-M32mvA1FBVfHGV8rkPW","title":"Mian Overview","pathname":"/mian","siteSpaceId":"sitesp_if2Xf","description":"OTU table visualization, data analysis, and machine learning"},{"id":"-MNWjMuwTwOYWMpxJeyT","title":"Tutorial","pathname":"/mian/tutorial","siteSpaceId":"sitesp_if2Xf","description":"Here we will analyze a lung microbiome OTU dataset from a Sze et al. COPD study using some of Mian's basic features."},{"id":"-M34Wt97jyVxbJUkDPMj","title":"Getting Started","pathname":"/mian/getting-started","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M34gDXUQdW4OL4tNJs6","title":"Projects","pathname":"/mian/projects","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M34kMuGkzdsPYffcs72","title":"Tool Parameters and Filters","pathname":"/mian/tool-parameters-and-filters","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M34kpBG3OnP4p2wmrVY","title":"Boxplots","pathname":"/mian/boxplots","siteSpaceId":"sitesp_if2Xf","description":"Generates a series of boxplots based on a grouping parameter."},{"id":"-M39dqNgKJ-63uKJmPTV","title":"Barplot (Composition)","pathname":"/mian/barplot-composition","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M39kmSYU8uH1CO8yVsz","title":"Donut (Composition)","pathname":"/mian/donut-composition","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M39oZOFsk5VRU9X5Z9b","title":"Scatterplot (Correlation)","pathname":"/mian/scatterplot-correlation","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M39rZ6hU8vMLq883XYy","title":"Heatmap (Correlation)","pathname":"/mian/heatmap-correlation","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M39uDScr1sRqGWJzfZE","title":"Heatmap (Composition)","pathname":"/mian/heatmap-composition","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M39w-brrCFtXDZ__Vtx","title":"Correlation Network","pathname":"/mian/correlation-network","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M39x1e2SLIxu6mE0QRB","title":"Rarefaction Curves","pathname":"/mian/rarefaction-curves","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M39xjKRZPbjgX1WLSQC","title":"Taxonomic Tree View","pathname":"/mian/taxonomic-tree-view","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M3A-V00Q2LyFIGcL3O9","title":"Table","pathname":"/mian/table","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M3A05EbyE9wa1PZTLx8","title":"Alpha Diversity","pathname":"/mian/alpha-diversity","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M3A1VWaWQBMLN91lUSO","title":"Beta Diversity","pathname":"/mian/beta-diversity","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M3A2KhGucJ6e_ZhLG0t","title":"NMDS","pathname":"/mian/nmds","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M3A2r-ES7B0TV3Pdu2Q","title":"PCoA","pathname":"/mian/pcoa","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M3ACJDEewOAF6n2fQpp","title":"Boruta (Feature Selection)","pathname":"/mian/boruta-feature-selection","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M3AHhJOY0bl-veJ3vP6","title":"Elastic Net Classification","pathname":"/mian/elastic-net-classification","siteSpaceId":"sitesp_if2Xf","description":"This tool fits a linear classifier with elastic-net regularization. This tool will then subsequently select the highest weight OTUs or taxonomic groups using recursive feature elimination."},{"id":"-M3AJTapCnrGCdF0tKLU","title":"Elastic Net Regression","pathname":"/mian/elastic-net-regression","siteSpaceId":"sitesp_if2Xf","description":"This tool fits a linear regressor with elastic-net regularization. This tool will then subsequently select the highest weighted OTUs or taxonomic groups using recursive feature elimination."},{"id":"-M3AKJZlzEsPZdtREYTo","title":"Fisher Exact Test","pathname":"/mian/fisher-exact-test","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M3ALw8q07_tfPY5y-MT","title":"Differential Selection","pathname":"/mian/differential-selection","siteSpaceId":"sitesp_if2Xf","description":"Univariate feature selection (categorical variables)"},{"id":"-M3AMi0ue921Z8TY1j39","title":"Correlations Selection","pathname":"/mian/correlations-selection","siteSpaceId":"sitesp_if2Xf","description":"Univariate feature selection (numeric values)"},{"id":"-M3UdnUKTOeas_Yd9dq2","title":"Linear Regressor","pathname":"/mian/linear-regressor","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M3UdrfuGoYFHZM-CWBO","title":"Linear Classifier","pathname":"/mian/linear-classifier","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M3UdtjQ_W7lXZ5nx99e","title":"Random Forest Classifier","pathname":"/mian/random-forest-classifier","siteSpaceId":"sitesp_if2Xf","description":""},{"id":"-M3UdwbSOYWNU0Zylhw2","title":"Deep Learning","pathname":"/mian/deep-learning","siteSpaceId":"sitesp_if2Xf","description":""}]}